8000 template: include container configs in nextflow.config by mashehu · Pull Request #4600 · nf-core/tools · GitHub
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template: include container configs in nextflow.config - #4600

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mashehu wants to merge 3 commits into
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add-include-container-configs
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mashehu wants to merge 3 commits into
devfrom
add-include-container-configs

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@mashehu
@mashehu mashehu commented Nov 9, 2026
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@codecov
codecov Bot commented Nov 9, 2026 •
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Codecov Report

❌ Patch coverage is 92.85714% with 2 lines in your changes missing coverage. Please review.
✅ Project coverage is 78.72%. Comparing base (cda9d01) to head (9a80553).

Files with missing lines Patch % Lines
nf_core/pipelines/containers_utils.py 89.47% 2 Missing ⚠️

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